How to cite

If you use IDPConformerGenerator, please always cite its original publication:

IDPConformerGenerator: A Flexible Software Suite for Sampling the Conformational Space of Disordered Protein States
João M. C. Teixeira, Zi Hao Liu, Ashley Namini, Jie Li, Robert M. Vernon, Mickaël Krzeminski, Alaa A. Shamandy, Oufan Zhang, Mojtaba Haghighatlari, Lei Yu, Teresa Head-Gordon, and Julie D. Forman-Kay
The Journal of Physical Chemistry A 2022 126 (35), 5985-6003
DOI: 10.1021/acs.jpca.2c03726

If you use the Local Disordered Region Sampling (LDRS) module, please also cite:

Zi Hao Liu, João M C Teixeira, Oufan Zhang, Thomas E Tsangaris, Jie Li, Claudiu C Gradinaru, Teresa Head-Gordon,
Julie D Forman-Kay, Local Disordered Region Sampling (LDRS) for ensemble modeling of proteins with experimentally undetermined
or low confidence prediction segments, Bioinformatics, Volume 39, Issue 12, December 2023, btad739,
https://doi.org/10.1093/bioinformatics/btad739

If you use the AlphaFlex protocol, please also cite:

Zi Hao Liu, Oufan Zhang, Stefano De Castro, Kunyang Sun, Hamidreza Ghafouri, Omar Abdelghani Attafi, Nicolas L Fawzi,
Silvio C E Tosatto, Alexander M Monzon, Alan M Moses, Teresa Head-Gordon, Julie D Forman-Kay,
AlphaFlex: Ensembles of the human proteome representing disordered regions, bioRxiv, November 2025,
https://doi.org/10.1101/2025.11.24.690279